STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5040ZINCFINGER PROTEIN. (144 aa)    
Predicted Functional Partners:
BF49_7283
FIG00441575 hypothetical protein.
  
   
 0.740
BF49_0153
FIG00440777 hypothetical protein.
  
     0.676
BF49_5041
Salicylate esterase.
       0.576
BF49_5039
Transcriptional regulator GntR family domain Aspartate aminotransferase EC 2611.
       0.566
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
 
   
 0.560
ctaG
Cytochrome oxidase biogenesis protein Cox11CtaG copper delivery to Cox1; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.523
BF49_0120
OstAlike protein.
  
     0.464
BF49_2976
FIG018229 hypothetical protein.
  
     0.456
BF49_4397
FIG00451076 hypothetical protein; Belongs to the UPF0335 family.
  
   
 0.441
atpF
ATP synthase F0 sector subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.437
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.