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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5044NacetylmuramoylLalanine amidase EC 35128. (287 aa)    
Predicted Functional Partners:
BF49_6787
Beta Nacetylglucosaminidase EC 32152.
 
  
 0.745
BF49_4202
NLPP60 family lipoprotein.
 
 
 0.675
murC
UDPNacetylmuramatealanine ligase EC 6328; Cell wall formation; Belongs to the MurCDEF family.
    
 0.621
BF49_0669
Membranebound lytic murein transglycosylase B precursor EC 321.
    
 0.620
BF49_3949
Hypothetical protein.
  
 
 0.605
BF49_3144
Betahexosaminidase EC 32152.
 
  
 0.602
BF49_4992
Thiaminphosphate pyrophosphorylase EC 2513; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).
 
      0.590
anmK
AnhydroNacetylmuramic acid kinase EC 271; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
   
 0.570
BF49_3490
AmpG permease.
 
  
 0.533
BF49_0085
Nucleotidyl transferase possibly involved in threonylcarbamoyladenosine formation.
  
     0.529
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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