STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5071Flp pilus assembly protein pilin Flp. (54 aa)    
Predicted Functional Partners:
BF49_4210
Type IIIV secretion system ATPase TadZCpaE associated with Flp pilus assembly.
 
  
 0.872
BF49_0178
Type IIIV secretion system ATPase TadZCpaE associated with Flp pilus assembly.
 
  
 0.869
BF49_4213
Flp pilus assembly protein RcpCCpaB.
 
  
 0.853
BF49_0175
Flp pilus assembly protein RcpCCpaB.
 
  
 0.852
BF49_4219
Similar to TadZCpaE associated with Flp pilus assembly.
 
  
 0.822
BF49_4214
Type IV prepilin peptidase TadVCpaA.
 
  
 0.820
BF49_4220
FIG00441414 hypothetical protein.
 
  
 0.812
BF49_4218
Similar to secretin RcpACpaC associated with Flp pilus assembly.
 
  
 0.793
BF49_6415
FIG00853462 hypothetical protein.
 
  
 0.786
BF49_4208
Flp pilus assembly protein TadB.
 
  
 0.783
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.