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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5093Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183. (357 aa)    
Predicted Functional Partners:
BF49_5173
Acetolactate synthase small subunit EC 2216.
  
 0.986
BF49_5171
Acetolactate synthase large subunit EC 2216.
 
 0.955
BF49_1727
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
 
 0.952
BF49_4844
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
 
 0.950
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
     
 0.949
BF49_1045
Acetolactate synthase large subunit EC 2216; Belongs to the TPP enzyme family.
  
 0.942
BF49_2759
Benzoylformate decarboxylase EC 4117.
  
 0.942
leuC
3isopropylmalate dehydratase large subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 0.935
BF49_4908
2oxoglutarate oxidoreductase beta subunit EC 1273.
   
 
 0.935
leuD
3isopropylmalate dehydratase small subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
 
 
 0.916
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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