Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_5094Nitratenitrite transporter. (432 aa)    
Predicted Functional Partners:
BF49_5093
Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183.
     
 0.730
BF49_7184
FIG00445077 hypothetical protein.
  
     0.652
BF49_5095
Aromatic hydrocarbon utilization transcriptional regulator CatR LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.532
nadX
LAspartate dehydrogenase EC 14121; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
       0.462
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
  
    0.460
BF49_1719
24dihydroxyhept2ene17dioic acid aldolase EC 412n4; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.411
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.411
BF49_3069
Llactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
   
 0.407
BF49_5092
16 kDa heat shock protein A; Belongs to the small heat shock protein (HSP20) family.
       0.404
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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