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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5095Aromatic hydrocarbon utilization transcriptional regulator CatR LysR family; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
BF49_4324
LysRfamily transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.748
BF49_1275
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.727
BF49_3117
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.716
BF49_3292
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
BF49_3526
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.694
BF49_0879
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.682
BF49_3093
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.676
nadX
LAspartate dehydrogenase EC 14121; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
       0.659
BF49_4334
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.653
BF49_5093
Tartrate dehydrogenase EC 11193 Tartrate decarboxylase EC 41173 Dmalic enzyme EC 11183.
 
     0.603
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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