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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5099FIG00440405 hypothetical protein. (208 aa)    
Predicted Functional Partners:
BF49_5100
Dihydroflavonol4reductase EC 111219.
 
    0.748
BF49_5316
Hypothetical protein.
  
     0.523
BF49_5101
Hypothetical protein.
       0.506
BF49_3145
Hypothetical protein contains weak similarity to NADH dehydrogenase I.
  
     0.487
BF49_0782
Endonuclease.
    
 0.477
rpsM
SSU ribosomal protein S13p S18e; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.444
BF49_0472
Hypothetical protein.
  
     0.422
BF49_2946
FIG00853207 hypothetical protein.
  
     0.419
BF49_3690
Conserved hypothetical protein putative signal peptide.
  
     0.418
BF49_7086
Hypothetical protein.
  
     0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.