STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5107Bsl6560 hypothetical protein. (52 aa)    
Predicted Functional Partners:
BF49_4273
Conserved hypothetical protein hypothetical UPF0337 protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.814
BF49_5560
Inosine5monophosphate dehydrogenase EC 111205.
  
  
 0.791
BF49_2393
FIG00441768 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.730
BF49_3886
UPF0337 protein blr1496; Belongs to the UPF0337 (CsbD) family.
  
  
 0.730
BF49_2951
FIG00794727 hypothetical protein.
   
    0.530
BF49_5106
ATPdependent DNA helicase UvrDPcrA.
       0.499
BF49_3301
Dodecin COG3360 Flavinbinding.
   
    0.485
BF49_5105
Protein of unknown function UPF0150.
       0.446
BF49_5929
FIG01006708 hypothetical protein.
  
     0.437
BF49_4653
Blr7651 hypothetical protein.
 
     0.414
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.