Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_51083hydroxyacylCoA dehydrogenase EC 11135. (168 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 
 0.875
BF49_6169
FIG00740931 hypothetical protein.
 
 
 0.628
BF49_7201
FIG00443883 hypothetical protein.
 
 
 0.623
BF49_5109
DLactate dehydrogenase cytochrome cdependent EC 1124.
       0.614
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 
 0.604
BF49_3997
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase isoleucine degradation EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 
 0.604
BF49_4171
3-hydroxyacyl-CoA dehydrogenase; EnoylCoA hydratase EC 42117 Delta3cisdelta2transenoylCoA isomerase EC 5338 3hydroxyacylCoA dehydrogenase EC 11135; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.604
BF49_0984
Malonyl CoAacyl carrier protein transacylase EC 23139.
  
  
 0.488
BF49_6910
Transporter.
  
     0.471
BF49_3002
FIG00441778 hypothetical protein.
  
     0.464
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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