Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_5165HflC protein; HflC and HflK could regulate a protease. (298 aa)    
Predicted Functional Partners:
BF49_5164
HflK protein; HflC and HflK could encode or regulate a protease.
 
 
0.996
ftsH
Cell division protein FtsH EC 3424; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
 0.930
BF49_5274
Cytochrome c oxidase polypeptide II EC 1931.
   
 
 0.744
BF49_5166
Putative inner membrane protein YjeT clustered with HflC.
     
 0.735
BF49_3024
ZINC PROTEASE EC 3499.
  
 0.699
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.666
hflX
GTPbinding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.666
BF49_3177
Putative activity regulator of membrane protease YbbK.
 
 
 0.655
BF49_3023
Protease; Belongs to the peptidase M16 family.
  
 0.649
BF49_4019
Mitochondrial processing peptidaselike protein EC 342464; Belongs to the peptidase M16 family.
  
 0.649
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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