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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_5174Bll6500 unknown protein. (229 aa)    
Predicted Functional Partners:
BF49_5172
Threonine dehydratase EC 43119.
   
 
 0.820
BF49_5173
Acetolactate synthase small subunit EC 2216.
       0.796
BF49_1435
CobN component of cobalt chelatase involved in B12 biosynthesis.
  
 
 0.556
BF49_0079
Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
   
 0.542
BF49_6410
FIG00439628 hypothetical protein.
   
 0.524
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
 
 0.493
BF49_5651
SAMdependent methyltransferase Dde 2880 UbiE paralog.
 
 
 0.481
BF49_6971
Hypothetical protein.
  
 0.478
BF49_5175
Permease of the drugmetabolite transporter DMT superfamily.
       0.465
BF49_5176
Transporter LysE family.
       0.465
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.