STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_6410FIG00439628 hypothetical protein. (264 aa)    
Predicted Functional Partners:
BF49_6411
FIG033376 Heat shock protein DnaJlike.
     0.948
BF49_1435
CobN component of cobalt chelatase involved in B12 biosynthesis.
  
 0.722
guaA
GMP synthase glutaminehydrolyzing EC 6352; Catalyzes the synthesis of GMP from XMP.
    
  0.645
cobB
Cobyrinic acid ACdiamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
    
 0.605
BF49_6409
FIG00443059 hypothetical protein.
  
  
 0.577
ubiG
3demethylubiquinone9 3methyltransferase EC 21164; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
 0.524
BF49_0695
Methyltransferase.
   
 0.524
BF49_2496
Hypothetical protein.
   
 0.524
BF49_3105
Putative Omethyl transferase.
   
 0.524
BF49_3857
Methyltransferase type 12.
   
 0.524
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.