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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_8G070900Uncharacterized protein. (659 aa)    
Predicted Functional Partners:
PRUPE_3G134700
Nuclear cap-binding protein subunit 2.
    
 0.609
PRUPE_4G257300
MIF4G domain-containing protein.
    
 0.591
PRUPE_1G250300
Uncharacterized protein.
   
  0.529
PRUPE_1G122000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.523
PRUPE_1G065000
Uncharacterized protein.
   
  
 0.488
PRUPE_1G347400
Uncharacterized protein.
    
 
 0.477
PRUPE_8G067100
Uncharacterized protein.
    
 
 0.460
PRUPE_4G124000
Uncharacterized protein.
    
 
 0.460
PRUPE_7G013500
C3H1-type domain-containing protein.
    
 
 0.460
PRUPE_3G255200
Uncharacterized protein.
      
 0.454
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.