Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PRUPE_8G173500Aa_trans domain-containing protein. (491 aa)    
Predicted Functional Partners:
PRUPE_5G166700
Amine oxidase.
      
 0.596
PRUPE_1G480700
F-box domain-containing protein.
      
 0.594
PRUPE_7G244300
F-box domain-containing protein.
      
 0.593
PRUPE_8G174900
Chitin-binding type-1 domain-containing protein.
      
 0.592
PRUPE_1G418400
Glyco_trans_2-like domain-containing protein.
      
 0.510
PRUPE_1G243500
Amine oxidase.
      
 0.506
PRUPE_6G273000
Aa_trans domain-containing protein.
  
     0.493
PRUPE_2G247800
Aa_trans domain-containing protein.
  
     0.491
PRUPE_8G163100
Aa_trans domain-containing protein.
  
     0.488
PRUPE_1G503100
Aa_trans domain-containing protein.
  
     0.463
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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