STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_7G170300VWFA domain-containing protein. (405 aa)    
Predicted Functional Partners:
PRUPE_6G320300
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.998
PRUPE_8G208900
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.997
PRUPE_5G025900
PCI domain-containing protein.
   
 0.996
PRUPE_3G134800
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.994
PRUPE_6G039300
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.994
PRUPE_3G030100
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.994
PRUPE_1G063800
RPN13_C domain-containing protein.
   
 0.994
PRUPE_5G156700
PCI domain-containing protein.
   
 0.993
PRUPE_1G376700
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.990
PRUPE_7G237100
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.989
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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