STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_6G179600Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
PRUPE_7G104300
ACPS domain-containing protein.
     
 0.913
PRUPE_2G075500
ACPS domain-containing protein.
     
 0.913
PRUPE_8G257100
Uncharacterized protein.
  
  
 
0.901
PRUPE_7G211200
Uncharacterized protein.
     
  0.900
PRUPE_3G090700
FPG_CAT domain-containing protein.
  
  
 0.833
PRUPE_7G156900
CTP_transf_like domain-containing protein.
    
 0.825
PRUPE_1G507900
Uncharacterized protein.
  
 0.707
PRUPE_3G169600
Uncharacterized protein.
    
  0.678
PRUPE_8G168500
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
  0.675
PRUPE_3G271000
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
  0.665
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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