STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_6G194500Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (532 aa)    
Predicted Functional Partners:
PRUPE_8G092500
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.561
PRUPE_6G089400
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
    0.476
PRUPE_6G119700
Glyco_hydro_18 domain-containing protein.
  
  
 0.476
PRUPE_4G164000
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.476
PRUPE_6G088400
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.465
PRUPE_6G152200
Bet_v_1 domain-containing protein.
  
     0.458
PRUPE_2G105000
Uncharacterized protein.
  
 
   0.455
PRUPE_7G172100
DUF632 domain-containing protein.
  
 
   0.447
PRUPE_6G105500
Uncharacterized protein.
  
     0.442
PRUPE_5G138800
DUF632 domain-containing protein.
  
 
   0.433
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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