STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_6G315200Uncharacterized protein. (903 aa)    
Predicted Functional Partners:
PRUPE_2G009100
BHLH domain-containing protein.
  
  0.554
PRUPE_2G264100
Uncharacterized protein.
  
     0.532
PRUPE_7G133000
Remorin_C domain-containing protein.
  
  
  0.529
PRUPE_8G128800
Uncharacterized protein.
  
  
  0.525
PRUPE_6G074100
HTH myb-type domain-containing protein.
  
 
  0.519
PRUPE_6G061700
Uncharacterized protein.
  
  
  0.517
PRUPE_3G257400
Uncharacterized protein.
  
 
  0.516
PRUPE_1G359400
Uncharacterized protein.
  
     0.513
PRUPE_1G360800
Uncharacterized protein.
  
 
  0.510
PRUPE_6G022200
BHLH domain-containing protein.
  
  0.509
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.