Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_5G203400Uncharacterized protein. (1910 aa)    
Predicted Functional Partners:
PRUPE_1G366100
Uncharacterized protein.
  
 
 0.575
PRUPE_6G211300
Glyco_transf_5 domain-containing protein.
  
 
 0.549
PRUPE_4G020100
Uncharacterized protein.
  
 
 0.549
PRUPE_2G029500
CaM_binding domain-containing protein.
  
     0.512
PRUPE_2G075900
Uncharacterized protein.
  
     0.495
PRUPE_8G202200
GTD-binding domain-containing protein.
  
     0.492
PRUPE_1G139000
CW-type domain-containing protein.
  
     0.492
PRUPE_1G347400
Uncharacterized protein.
  
     0.492
PRUPE_1G376500
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.492
PRUPE_2G211400
Uncharacterized protein.
  
   
 0.479
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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