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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_5G204500Hist_deacetyl domain-containing protein. (667 aa)    
Predicted Functional Partners:
PRUPE_1G358300
Uncharacterized protein.
    
 0.833
PRUPE_6G035300
Uncharacterized protein.
    
 0.833
PRUPE_6G312100
Uncharacterized protein.
    
 0.830
PRUPE_1G008100
Uncharacterized protein.
    
 0.830
PRUPE_1G143200
Uncharacterized protein.
    
 0.716
PRUPE_1G506200
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.709
PRUPE_5G167200
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
0.706
PRUPE_7G209600
WD_REPEATS_REGION domain-containing protein.
   
 0.699
PRUPE_3G049900
WD_REPEATS_REGION domain-containing protein.
   
 0.699
PRUPE_8G183700
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
0.682
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.