STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_4G020400Autophagy-related protein. (197 aa)    
Predicted Functional Partners:
PRUPE_5G165800
Uncharacterized protein.
   
 0.991
PRUPE_5G165900
Uncharacterized protein.
   
 0.991
PRUPE_2G000200
Cysteine protease.
  
 0.991
PRUPE_4G060100
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.986
PRUPE_2G123000
Autophagy-related protein 3.
   
 0.984
PRUPE_6G164600
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.759
PRUPE_6G165600
Protein kinase domain-containing protein.
   
 0.759
PRUPE_3G042200
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
   
 0.730
PRUPE_1G100700
Uncharacterized protein.
   
 0.719
PRUPE_1G579800
Autophagy protein 5; Required for autophagy.
   
 0.700
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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