STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_4G128100Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (526 aa)    
Predicted Functional Partners:
PRUPE_3G186500
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.969
PRUPE_7G000400
Uncharacterized protein.
    
 0.936
PRUPE_3G048100
Uncharacterized protein.
    
 0.911
PRUPE_2G230300
Transket_pyr domain-containing protein.
   
 
 0.909
PRUPE_2G230400
Transket_pyr domain-containing protein.
   
 
 0.909
PRUPE_3G169400
Citrate synthase.
  
 0.894
PRUPE_2G002900
Citrate synthase; Belongs to the citrate synthase family.
  
 0.894
PRUPE_1G250100
Uncharacterized protein.
  
 0.880
PRUPE_1G117200
Ligase_CoA domain-containing protein.
  
 0.880
PRUPE_1G108300
Uncharacterized protein.
  
 0.880
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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