Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_4G254200B30.2/SPRY domain-containing protein. (436 aa)    
Predicted Functional Partners:
PRUPE_5G058900
WD_REPEATS_REGION domain-containing protein.
    
 0.998
PRUPE_7G167800
WD_REPEATS_REGION domain-containing protein.
   
 0.995
PRUPE_3G290600
WD_REPEATS_REGION domain-containing protein.
   
 0.995
PRUPE_2G042400
Uncharacterized protein.
    
 0.990
PRUPE_1G574100
Uncharacterized protein.
    
 0.970
PRUPE_8G239500
WD_REPEATS_REGION domain-containing protein.
   
 0.963
PRUPE_6G211800
WD_REPEATS_REGION domain-containing protein.
   
 0.963
PRUPE_7G183600
Uncharacterized protein.
    
 0.956
PRUPE_1G177800
Uncharacterized protein.
    
 0.946
PRUPE_2G187600
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
    
 0.942
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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