STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_3G203700Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (167 aa)    
Predicted Functional Partners:
PRUPE_8G239300
Uncharacterized protein.
  
     0.525
PRUPE_6G331600
Uncharacterized protein.
  
     0.525
PRUPE_3G189200
Uncharacterized protein.
  
     0.524
PRUPE_4G278900
Uncharacterized protein.
  
     0.515
PRUPE_1G031200
HTH myb-type domain-containing protein.
  
     0.514
PRUPE_3G182900
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
  
  0.511
PRUPE_5G158200
AvrRpt-cleavage domain-containing protein.
  
     0.510
PRUPE_6G340400
Uncharacterized protein.
  
     0.510
PRUPE_2G308200
Uncharacterized protein.
  
     0.508
PRUPE_2G203100
NAC domain-containing protein.
  
     0.507
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.