STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_3G280200Uncharacterized protein. (1635 aa)    
Predicted Functional Partners:
PRUPE_5G021900
Uncharacterized protein.
  
   
 0.493
PRUPE_5G112200
Uncharacterized protein.
  
     0.483
PRUPE_2G329200
Uncharacterized protein.
  
     0.474
PRUPE_2G071500
OVATE domain-containing protein.
  
     0.466
PRUPE_8G151500
Uncharacterized protein.
  
     0.450
PRUPE_7G256800
Uncharacterized protein.
  
     0.446
PRUPE_3G064200
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.436
PRUPE_8G050700
Uncharacterized protein.
  
     0.431
PRUPE_8G014200
Uncharacterized protein.
  
     0.426
PRUPE_1G330400
GTD-binding domain-containing protein.
  
     0.425
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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