Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_1G249300Uncharacterized protein. (647 aa)    
Predicted Functional Partners:
PRUPE_1G243200
Uncharacterized protein.
    
 0.623
PRUPE_6G330500
PsbP domain-containing protein.
      
 0.599
PRUPE_1G153300
Uncharacterized protein.
      
 0.599
PRUPE_2G329400
Uncharacterized protein.
      
 0.598
PRUPE_1G367100
TP_methylase domain-containing protein.
      
 0.598
PRUPE_1G368400
Uncharacterized protein.
      
 0.595
PRUPE_5G032400
TPR_REGION domain-containing protein.
      
 0.592
PRUPE_6G253700
Uncharacterized protein.
      
 0.538
PRUPE_1G482200
Uncharacterized protein.
    
 0.528
PRUPE_8G030900
Uncharacterized protein.
     
 0.526
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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