Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PRUPE_1G429500MRG domain-containing protein. (334 aa)    
Predicted Functional Partners:
PRUPE_1G506200
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.949
PRUPE_3G006800
SANT domain-containing protein.
    
 0.906
PRUPE_6G228700
MRG domain-containing protein.
  
  
 
0.903
PRUPE_7G168000
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.903
PRUPE_2G323000
YL1_C domain-containing protein.
    
 0.888
PRUPE_4G154200
Uncharacterized protein; Belongs to the actin family.
   
 0.887
PRUPE_8G137800
Uncharacterized protein.
    
 
 0.873
PRUPE_4G135700
Uncharacterized protein.
    
 0.867
PRUPE_1G544700
RuvB-like helicase; Belongs to the RuvB family.
   
 0.857
PRUPE_6G137000
RuvB-like helicase; Belongs to the RuvB family.
   
 0.848
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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