STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_1G448600AP2/ERF domain-containing protein. (256 aa)    
Predicted Functional Partners:
PRUPE_1G388600
Dof-type domain-containing protein.
  
     0.483
PRUPE_7G142500
Dof-type domain-containing protein.
  
     0.458
PRUPE_5G210200
Dof-type domain-containing protein.
  
     0.453
PRUPE_4G061400
Dof-type domain-containing protein.
  
     0.449
PRUPE_4G050200
Dof-type domain-containing protein.
  
     0.444
PRUPE_2G192300
Dof-type domain-containing protein.
  
     0.405
PRUPE_1G496500
PHD-type domain-containing protein.
  
     0.405
PRUPE_6G253300
Dof-type domain-containing protein.
  
     0.400
PRUPE_3G107700
ACT domain-containing protein.
  
     0.400
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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