STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_1G489600HUN domain-containing protein. (752 aa)    
Predicted Functional Partners:
PRUPE_1G443500
Uncharacterized protein.
      
 0.536
PRUPE_1G371200
FHA domain-containing protein.
  
   
 0.497
PRUPE_8G255400
CW-type domain-containing protein.
  
     0.493
PRUPE_8G262800
Uncharacterized protein.
  
     0.463
PRUPE_3G037300
Uncharacterized protein.
  
     0.453
PRUPE_6G255500
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
  
     0.450
PRUPE_1G486500
Uncharacterized protein.
  
     0.447
PRUPE_1G506100
Uncharacterized protein.
  
     0.447
PRUPE_1G233200
Uncharacterized protein.
      
 0.443
PRUPE_8G201800
Uncharacterized protein.
  
   
 0.442
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.