STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_1G560800FBPase domain-containing protein. (72 aa)    
Predicted Functional Partners:
PRUPE_4G180000
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
   
 
 0.805
PRUPE_5G234300
Uncharacterized protein.
  
 
 0.769
PRUPE_2G143600
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.735
PRUPE_3G245700
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
  
 0.660
PRUPE_5G118100
PPM-type phosphatase domain-containing protein.
      
 0.653
PRUPE_2G285600
PPM-type phosphatase domain-containing protein.
      
 0.653
PRUPE_1G408100
PPM-type phosphatase domain-containing protein.
      
 0.653
PRUPE_7G220600
PPM-type phosphatase domain-containing protein.
      
 0.653
PRUPE_3G300000
Uncharacterized protein.
   
 
 0.619
PRUPE_1G380500
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.619
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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