STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_8G049100WD_REPEATS_REGION domain-containing protein. (389 aa)    
Predicted Functional Partners:
PRUPE_2G266600
Ribosomal_L16 domain-containing protein.
    
 
 0.879
PRUPE_8G107100
Ribosomal_L16 domain-containing protein.
    
 
 0.879
PRUPE_6G039000
Ribosomal_L16 domain-containing protein.
    
 
 0.879
PRUPE_7G210200
Uncharacterized protein.
   
  
 0.779
PRUPE_7G211000
WD_REPEATS_REGION domain-containing protein.
   
  
 0.779
PRUPE_3G050800
Uncharacterized protein.
   
  
 0.779
PRUPE_1G210000
Fes1 domain-containing protein.
    
 
 0.773
rpl16
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.773
rps3
30S ribosomal protein S3, chloroplastic; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.773
PRUPE_6G258500
TOG domain-containing protein.
    
 
 0.773
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.