STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_5G094000Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
PRUPE_2G050200
Uncharacterized protein.
  
  
  0.539
PRUPE_1G176200
Uncharacterized protein.
  
 
   0.538
PRUPE_1G149800
Uncharacterized protein.
  
     0.536
PRUPE_6G161600
Prolamin_like domain-containing protein.
  
     0.536
PRUPE_3G054700
F-box domain-containing protein.
  
 
   0.535
PRUPE_2G277700
Uncharacterized protein.
  
     0.529
PRUPE_4G158100
Uncharacterized protein.
  
     0.528
PRUPE_4G264700
Gnk2-homologous domain-containing protein.
  
     0.526
PRUPE_6G365300
Uncharacterized protein.
  
     0.524
PRUPE_8G034800
Prolamin_like domain-containing protein.
  
     0.521
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.