STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUPE_1G480700F-box domain-containing protein. (646 aa)    
Predicted Functional Partners:
PRUPE_2G058500
Uncharacterized protein.
    
 0.928
PRUPE_2G058400
Uncharacterized protein.
    
 0.928
PRUPE_6G018200
Uncharacterized protein.
     
 0.912
PRUPE_7G244300
F-box domain-containing protein.
  
  
 
0.901
PRUPE_6G181600
Uncharacterized protein.
     
 0.901
PRUPE_8G173500
Aa_trans domain-containing protein.
      
 0.729
PRUPE_7G177800
Aa_trans domain-containing protein.
      
 0.729
PRUPE_1G356000
Aa_trans domain-containing protein.
      
 0.729
PRUPE_1G356100
Aa_trans domain-containing protein.
      
 0.729
PRUPE_5G166700
Amine oxidase.
      
 0.728
Your Current Organism:
Prunus persica
NCBI taxonomy Id: 3760
Other names: Amygdalus persica, P. persica, Persica vulgaris, Persica vulgaris Mill., Prunus persica (L.) Batsch, Prunus persica var. densa, Prunus persica var. densa Makino, peach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.