STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ76398.1All-trans-retinol 13,14-reductase. (491 aa)    
Predicted Functional Partners:
SDZ76460.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.962
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
     0.950
SDZ76529.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.940
SDZ76513.1
Hypothetical protein.
 
     0.939
SDZ76548.1
Predicted exporter.
 
     0.939
SDZ76480.1
phenylacetate-CoA ligase.
 
     0.930
SDZ76706.1
Predicted acyltransferase, LPLAT superfamily.
 
  
 0.923
SDZ76379.1
3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.916
SDZ76587.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.893
SDZ76638.1
3-oxoacyl-[acyl-carrier-protein] synthase II.
 
     0.888
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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