STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ78394.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (326 aa)    
Predicted Functional Partners:
SDZ78431.1
Peptide/nickel transport system permease protein.
 
 0.999
SDZ78448.1
Peptide/nickel transport system permease protein.
 
 0.998
SEA09908.1
Peptide/nickel transport system permease protein.
 
 0.992
SDZ73578.1
Dipeptide transport system permease protein.
 
 0.988
SDZ78410.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.984
SEA09847.1
Peptide/nickel transport system permease protein.
 
 0.926
SDZ78467.1
Peptide/nickel transport system substrate-binding protein.
 
 0.902
SDZ73566.1
Dipeptide transport system permease protein.
 
 0.893
SDZ77619.1
Energy-coupling factor transport system ATP-binding protein.
  
 
0.813
SDZ73601.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.759
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.