STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ81484.1Type II secretion system protein N. (287 aa)    
Predicted Functional Partners:
SDZ81436.1
GspL domain-containing protein.
       0.788
SDZ81456.1
General secretion pathway protein M.
       0.788
SDZ81373.1
General secretion pathway protein I.
       0.787
SDZ81392.1
General secretion pathway protein J.
       0.787
SDZ81416.1
General secretion pathway protein K.
       0.787
SDZ81351.1
General secretion pathway protein H.
       0.773
SDZ81284.1
Type II secretion system protein D (GspD).
       0.547
SDZ81257.1
Type II secretion system protein C (GspC).
       0.532
SDZ81308.1
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
       0.517
SDZ81327.1
General secretion pathway protein F.
       0.517
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.