STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ82796.1Transcriptional regulator, XRE family with cupin sensor. (197 aa)    
Predicted Functional Partners:
SDZ79614.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.779
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.674
SDZ82817.1
Phosphoglycolate phosphatase, HAD superfamily.
    
  0.605
SDZ76264.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.574
SDZ82772.1
Enhancing lycopene biosynthesis protein 2.
       0.574
SEA39308.1
N-acetylglutamate synthase, GNAT family; Belongs to the acetyltransferase family.
    
  0.569
rpsQ
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
    0.552
SEA55582.1
Serine/threonine-protein kinase HipA.
  
 
 0.549
SDZ82839.1
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
    
  0.509
SEA71447.1
Tfp pilus assembly protein PilF.
    
 0.499
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.