Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ76264.1 | SDZ90877.1 | SAMN05660420_00179 | SAMN05660420_00687 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Protein of unknown function. | 0.479 |
SDZ76264.1 | SEA00906.1 | SAMN05660420_00179 | SAMN05660420_01050 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Rhodanese-related sulfurtransferase. | 0.496 |
SDZ76264.1 | SEA27457.1 | SAMN05660420_00179 | SAMN05660420_01685 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.630 |
SDZ78523.1 | SDZ90877.1 | SAMN05660420_00296 | SAMN05660420_00687 | DnaJ like chaperone protein. | Protein of unknown function. | 0.462 |
SDZ78523.1 | SEA27433.1 | SAMN05660420_00296 | SAMN05660420_01684 | DnaJ like chaperone protein. | Cysteine desulfurase. | 0.760 |
SDZ78523.1 | SEA27457.1 | SAMN05660420_00296 | SAMN05660420_01685 | DnaJ like chaperone protein. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.993 |
SDZ78523.1 | iscS | SAMN05660420_00296 | SAMN05660420_01401 | DnaJ like chaperone protein. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.760 |
SDZ90850.1 | SDZ90877.1 | SAMN05660420_00686 | SAMN05660420_00687 | Hypothetical protein. | Protein of unknown function. | 0.517 |
SDZ90850.1 | SDZ90901.1 | SAMN05660420_00686 | SAMN05660420_00688 | Hypothetical protein. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.432 |
SDZ90877.1 | SDZ76264.1 | SAMN05660420_00687 | SAMN05660420_00179 | Protein of unknown function. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.479 |
SDZ90877.1 | SDZ78523.1 | SAMN05660420_00687 | SAMN05660420_00296 | Protein of unknown function. | DnaJ like chaperone protein. | 0.462 |
SDZ90877.1 | SDZ90850.1 | SAMN05660420_00687 | SAMN05660420_00686 | Protein of unknown function. | Hypothetical protein. | 0.517 |
SDZ90877.1 | SDZ90901.1 | SAMN05660420_00687 | SAMN05660420_00688 | Protein of unknown function. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.631 |
SDZ90877.1 | SEA00906.1 | SAMN05660420_00687 | SAMN05660420_01050 | Protein of unknown function. | Rhodanese-related sulfurtransferase. | 0.451 |
SDZ90877.1 | SEA14619.1 | SAMN05660420_00687 | SAMN05660420_01376 | Protein of unknown function. | Uncharacterized lipoprotein YmbA. | 0.444 |
SDZ90877.1 | SEA27433.1 | SAMN05660420_00687 | SAMN05660420_01684 | Protein of unknown function. | Cysteine desulfurase. | 0.715 |
SDZ90877.1 | SEA27457.1 | SAMN05660420_00687 | SAMN05660420_01685 | Protein of unknown function. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.746 |
SDZ90877.1 | iscS | SAMN05660420_00687 | SAMN05660420_01401 | Protein of unknown function. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.715 |
SDZ90877.1 | polA | SAMN05660420_00687 | SAMN05660420_00689 | Protein of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.572 |
SDZ90901.1 | SDZ90850.1 | SAMN05660420_00688 | SAMN05660420_00686 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Hypothetical protein. | 0.432 |
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