STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA00095.1Protein of unknown function. (274 aa)    
Predicted Functional Partners:
SEA72251.1
Major Facilitator Superfamily protein.
  
     0.645
SEA26474.1
CHAD domain-containing protein.
  
     0.510
SDZ96359.1
Cytochrome c554 and c-prime.
  
     0.480
SDZ79545.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
  
     0.464
SEA39209.1
Outer membrane protein TolC.
  
     0.461
SDZ81771.1
Protein phosphatase 2C.
  
     0.451
SEA00123.1
SprT-like family protein.
       0.450
SDZ80741.1
Transporter, cation-chloride cotransporter (CCC) family.
  
     0.444
SEA70822.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.443
SEA00156.1
Membrane associated serine protease, rhomboid family.
 
     0.425
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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