STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA06292.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
SEA06319.1
TRAP transporter, 4TM/12TM fusion protein.
 
  0.992
SEA22268.1
TRAP transporter, 4TM/12TM fusion protein.
    0.857
SDZ92580.1
TRAP transporter, 4TM/12TM fusion protein.
    0.834
SEA00821.1
TRAP transporter, 4TM/12TM fusion protein.
    0.826
SDZ93298.1
NMT1-like family protein.
  
     0.774
SEA06265.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
       0.445
SEA06240.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB.
       0.430
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.