STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA14388.1Lactoylglutathione lyase. (127 aa)    
Predicted Functional Partners:
SDZ99761.1
Glyoxylase, beta-lactamase superfamily II; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
  
  
 0.909
SEA61836.1
methylmalonyl-CoA mutase.
    
 0.865
SDZ76264.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.851
SEA71133.1
Glyoxylase, beta-lactamase superfamily II.
  
 
 0.846
SEA46989.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 0.798
SEA56380.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 0.795
ilvA
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 0.793
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.755
trpB-2
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.755
SEA81833.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.743
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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