STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA25728.1Polar amino acid transport system substrate-binding protein. (255 aa)    
Predicted Functional Partners:
SEA27838.1
Signal transduction histidine kinase.
  
 0.860
SEA25755.1
Signal transduction histidine kinase.
    
  0.816
SDZ80108.1
PAS domain S-box-containing protein.
   
 0.809
SEA21911.1
PAS domain S-box-containing protein.
  
 0.799
SDZ83665.1
Response regulator receiver domain-containing protein.
   
 0.762
SEA57094.1
PAS domain S-box-containing protein.
    
 0.737
SEA09339.1
Chorismate mutase.
     
 0.687
SEA72969.1
PAS fold-containing protein.
  
  
 0.683
SEA72948.1
Polar amino acid transport system substrate-binding protein.
  
     0.671
SEA41321.1
PAS domain-containing protein.
  
  
 0.665
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.