STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA30013.1Uncharacterized conserved protein, DUF169 family. (328 aa)    
Predicted Functional Partners:
SDZ76264.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.996
SEA81833.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.958
SEA81866.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.922
SDZ74896.1
Formate dehydrogenase beta subunit.
  
 0.920
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.916
SEA37004.1
Glutamate synthase (NADH) large subunit.
    
  0.894
SEA46661.1
Allosteric NADP-dependent malic enzyme.
    
 0.836
SEA30035.1
Hypothetical protein.
 
     0.805
SEA29989.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
    
  0.803
SEA61836.1
methylmalonyl-CoA mutase.
     
 0.760
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.