STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA37201.1TrpR family transcriptional regulator, trp operon repressor. (81 aa)    
Predicted Functional Partners:
SEA38106.1
iron(III) transport system substrate-binding protein.
  
     0.564
SEA37171.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.539
SEA71962.1
PilZ domain-containing protein.
  
     0.539
SEA40301.1
Putative tricarboxylic transport membrane protein.
  
     0.462
SEA37743.1
LEA14-like dessication related protein.
  
     0.452
SEA59888.1
Hypothetical protein.
  
     0.413
SEA38048.1
iron(III) transport system permease protein.
  
     0.412
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.