STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA44927.1Sugar transferase, PEP-CTERM/EpsH1 system associated. (424 aa)    
Predicted Functional Partners:
SEA44973.1
Asparagine synthase (glutamine-hydrolysing).
 
   
 0.903
SEA45000.1
Hypothetical protein.
 
     0.889
SEA45023.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.861
SEA45090.1
Probable O-glycosylation ligase, exosortase A-associated.
 
 
 0.851
SEA44733.1
FemAB-related protein, PEP-CTERM system-associated.
 
     0.849
SEA44685.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
   
 0.834
SEA44947.1
Glycosyltransferase, GT2 family.
 
  
 0.818
SEA45231.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.818
SEA45276.1
Exosortase.
 
     0.805
SEA44808.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.785
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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