STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA55582.1Serine/threonine-protein kinase HipA. (415 aa)    
Predicted Functional Partners:
SEA55560.1
Transcriptional regulator, y4mF family.
 
 
 0.976
SEA80582.1
Protein of unknown function.
 
 
 0.610
SEA49963.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.598
SEA61819.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.598
SDZ82796.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.549
SEA14043.1
Helix-turn-helix domain-containing protein.
  
 
 0.549
SEA49939.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.549
SEA12076.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
 
   
 0.484
SEA55604.1
Hypothetical protein.
       0.429
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.