STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA57204.1Peptidase family M48. (272 aa)    
Predicted Functional Partners:
SEA57181.1
Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family.
 
     0.861
SEA57158.1
Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family.
       0.782
SDZ80057.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.617
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.606
ribBA-2
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.606
SEA34752.1
His Kinase A (phospho-acceptor) domain-containing protein.
     
 0.600
SDZ80163.1
CHASE3 domain-containing protein.
  
  
  0.559
SEA13492.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
   
   0.481
SEA49384.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.427
SEA57137.1
Hypothetical protein.
       0.425
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.