STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA57340.1FecR family protein. (144 aa)    
Predicted Functional Partners:
SEA57381.1
Adenylate cyclase.
 
     0.937
SEA57363.1
OmpA family protein.
 
     0.921
SEA82077.1
Ca2+-binding protein, RTX toxin-related.
 
  
  0.596
SEA83619.1
Protein of unknown function.
 
  
  0.508
SEA08340.1
Murein L,D-transpeptidase YafK.
  
   
 0.448
SEA38375.1
Putative two-component system response regulator.
 
     0.423
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.