STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA57363.1OmpA family protein. (197 aa)    
Predicted Functional Partners:
SEA57340.1
FecR family protein.
 
     0.921
SEA57381.1
Adenylate cyclase.
 
     0.859
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.846
SDZ79614.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.739
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.719
SDZ81618.1
Outer membrane protein OmpA.
  
 
 0.636
SEA53495.1
Chemotaxis protein MotB.
  
 
 0.593
SEA57414.1
OmpA-OmpF porin, OOP family.
  
     0.584
SEA10132.1
Periplasmic chaperone for outer membrane proteins Skp.
  
 
 0.522
SDZ74056.1
Chemotaxis protein MotB.
  
 
 0.514
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.