STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA62754.1Short chain amide porin. (379 aa)    
Predicted Functional Partners:
SEA62776.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
  
 0.994
SEA62711.1
Cytochrome c554 and c-prime.
  
  
 0.931
SEA62663.1
Hypothetical protein.
 
  
 0.841
SEA62629.1
Hypothetical protein.
 
     0.821
SDZ96742.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
    0.672
SEA27248.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
    0.672
SEA62735.1
Hypothetical protein.
       0.556
SEA62801.1
Transcriptional regulator, TetR family.
 
     0.545
SEA27328.1
Rhodanese-like domain-containing protein.
 
    0.540
SDZ81193.1
Putative NAD(P)H quinone oxidoreductase, PIG3 family.
  
     0.510
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.